Cluster: Rep_2546_CGC10
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2546
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2546_c_71 | Rep_2546_c_71_4 | 3060 | 5006 | - | 3.A.1.135.5 |
| TC | Rep_2546_c_71 | Rep_2546_c_71_5 | 4999 | 6795 | - | 3.A.1.135.5 |
| TF | Rep_2546_c_71 | Rep_2546_c_71_6 | 6883 | 7323 | - | MarR |
| TC | Rep_2546_c_71 | Rep_2546_c_71_7 | 7563 | 8312 | + | 9.B.143.2.3 |
| TF | Rep_2546_c_71 | Rep_2546_c_71_8 | 8416 | 9414 | - | LacI |
| pfam | Rep_2546_c_71 | Rep_2546_c_71_9 | 10183 | 10878 | - | ABC_trans_CmpB |
| CAZyme | Rep_2546_c_71 | Rep_2546_c_71_10 | 10871 | 12073 | - | GT4 |
Gene ID: Rep_2546_c_71_4
Type: TC
Location: 3060 - 5006 (-)
Type: TC
Location: 3060 - 5006 (-)
Gene ID: Rep_2546_c_71_5
Type: TC
Location: 4999 - 6795 (-)
Type: TC
Location: 4999 - 6795 (-)
Gene ID: Rep_2546_c_71_6
Type: TF
Location: 6883 - 7323 (-)
Type: TF
Location: 6883 - 7323 (-)
Gene ID: Rep_2546_c_71_7
Type: TC
Location: 7563 - 8312 (+)
Type: TC
Location: 7563 - 8312 (+)
Gene ID: Rep_2546_c_71_8
Type: TF
Location: 8416 - 9414 (-)
Type: TF
Location: 8416 - 9414 (-)
Gene ID: Rep_2546_c_71_9
Type: pfam
Location: 10183 - 10878 (-)
Type: pfam
Location: 10183 - 10878 (-)
Gene ID: Rep_2546_c_71_10
Type: CAZyme
Location: 10871 - 12073 (-)
Type: CAZyme
Location: 10871 - 12073 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Borkfalkia
Species
Borkfalkia excrementipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.