Cluster: Rep_253_CGC18
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 5
- Substrate:
- Genome ID: Rep_253
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_253_c_12 | Rep_253_c_12_16 | 18197 | 19882 | + | 3.A.1.106.2 |
| CAZyme | Rep_253_c_12 | Rep_253_c_12_17 | 20180 | 22015 | + | GH13_46 |
| CAZyme | Rep_253_c_12 | Rep_253_c_12_18 | 22015 | 22899 | + | GT2 |
| pfam | Rep_253_c_12 | Rep_253_c_12_19 | 22906 | 24204 | - | ABC2_membrane_2 | ABC2_membrane_3 |
| TC | Rep_253_c_12 | Rep_253_c_12_20 | 24201 | 25145 | - | 3.A.1.124.6 |
| CAZyme | Rep_253_c_12 | Rep_253_c_12_21 | 25249 | 27201 | - | GH13_14 |
| CAZyme | Rep_253_c_12 | Rep_253_c_12_22 | 27254 | 29392 | - | GH97 |
| CAZyme | Rep_253_c_12 | Rep_253_c_12_23 | 29460 | 32144 | - | CBM20 | GH77 |
| pfam | Rep_253_c_12 | Rep_253_c_12_24 | 32475 | 33644 | + | PDZ_6 |
| pfam | Rep_253_c_12 | Rep_253_c_12_25 | 33649 | 34431 | + | S6PP | Hydrolase_3 |
| TC | Rep_253_c_12 | Rep_253_c_12_26 | 34554 | 35477 | + | 2.A.115.1.1 |
| pfam | Rep_253_c_12 | Rep_253_c_12_27 | 35510 | 36277 | - | ABC2_membrane_2 |
| TC | Rep_253_c_12 | Rep_253_c_12_28 | 36265 | 36969 | - | 3.A.1.138.1 |
Gene ID: Rep_253_c_12_16
Type: TC
Location: 18197 - 19882 (+)
Type: TC
Location: 18197 - 19882 (+)
Gene ID: Rep_253_c_12_17
Type: CAZyme
Location: 20180 - 22015 (+)
Type: CAZyme
Location: 20180 - 22015 (+)
Gene ID: Rep_253_c_12_18
Type: CAZyme
Location: 22015 - 22899 (+)
Type: CAZyme
Location: 22015 - 22899 (+)
Gene ID: Rep_253_c_12_19
Type: pfam
Location: 22906 - 24204 (-)
Type: pfam
Location: 22906 - 24204 (-)
Gene ID: Rep_253_c_12_20
Type: TC
Location: 24201 - 25145 (-)
Type: TC
Location: 24201 - 25145 (-)
Gene ID: Rep_253_c_12_21
Type: CAZyme
Location: 25249 - 27201 (-)
Type: CAZyme
Location: 25249 - 27201 (-)
Gene ID: Rep_253_c_12_22
Type: CAZyme
Location: 27254 - 29392 (-)
Type: CAZyme
Location: 27254 - 29392 (-)
Gene ID: Rep_253_c_12_23
Type: CAZyme
Location: 29460 - 32144 (-)
Type: CAZyme
Location: 29460 - 32144 (-)
Gene ID: Rep_253_c_12_24
Type: pfam
Location: 32475 - 33644 (+)
Type: pfam
Location: 32475 - 33644 (+)
Gene ID: Rep_253_c_12_25
Type: pfam
Location: 33649 - 34431 (+)
Type: pfam
Location: 33649 - 34431 (+)
Gene ID: Rep_253_c_12_26
Type: TC
Location: 34554 - 35477 (+)
Type: TC
Location: 34554 - 35477 (+)
Gene ID: Rep_253_c_12_27
Type: pfam
Location: 35510 - 36277 (-)
Type: pfam
Location: 35510 - 36277 (-)
Gene ID: Rep_253_c_12_28
Type: TC
Location: 36265 - 36969 (-)
Type: TC
Location: 36265 - 36969 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella multisaccharivorax
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.