Cluster: Rep_2530_CGC5
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2530
- CGC Family ID: CGCFAM_07456
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2530_c_1 | Rep_2530_c_1_166 | 169833 | 171602 | + | 3.A.2.2.2 |
| TC | Rep_2530_c_1 | Rep_2530_c_1_167 | 171602 | 172978 | + | 3.A.2.2.2 |
| TC | Rep_2530_c_1 | Rep_2530_c_1_168 | 172987 | 173625 | + | 3.A.2.2.2 |
| NULL(UNKNOWN) | Rep_2530_c_1 | Rep_2530_c_1_169 | 173838 | 174503 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_2530_c_1 | Rep_2530_c_1_170 | 174674 | 177076 | - | GH3 |
| TC | Rep_2530_c_1 | Rep_2530_c_1_171 | 177280 | 178098 | - | 3.A.1.17.3 |
| TC | Rep_2530_c_1 | Rep_2530_c_1_172 | 178077 | 178835 | - | 3.A.1.17.8 |
Gene ID: Rep_2530_c_1_166
Type: TC
Location: 169833 - 171602 (+)
Type: TC
Location: 169833 - 171602 (+)
Gene ID: Rep_2530_c_1_167
Type: TC
Location: 171602 - 172978 (+)
Type: TC
Location: 171602 - 172978 (+)
Gene ID: Rep_2530_c_1_168
Type: TC
Location: 172987 - 173625 (+)
Type: TC
Location: 172987 - 173625 (+)
Gene ID: Rep_2530_c_1_169
Type:
Location: 173838 - 174503 (+)
Type:
Location: 173838 - 174503 (+)
Gene ID: Rep_2530_c_1_170
Type: CAZyme
Location: 174674 - 177076 (-)
Type: CAZyme
Location: 174674 - 177076 (-)
Gene ID: Rep_2530_c_1_171
Type: TC
Location: 177280 - 178098 (-)
Type: TC
Location: 177280 - 178098 (-)
Gene ID: Rep_2530_c_1_172
Type: TC
Location: 178077 - 178835 (-)
Type: TC
Location: 178077 - 178835 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-917
Genus
HGM11377
Species
HGM11377 sp900755035
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.