Cluster: Rep_2530_CGC12
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2530
- CGC Family ID: CGCFAM_00104
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2530_c_3 | Rep_2530_c_3_207 | 232085 | 233698 | + | 2.A.15.2.2 |
| pfam | Rep_2530_c_3 | Rep_2530_c_3_208 | 233751 | 234617 | - | LicD |
| CAZyme | Rep_2530_c_3 | Rep_2530_c_3_209 | 234750 | 235940 | + | GT4 |
| NULL(UNKNOWN) | Rep_2530_c_3 | Rep_2530_c_3_210 | 235940 | 236197 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_2530_c_3 | Rep_2530_c_3_211 | 236143 | 237045 | + | GT4 |
| TC | Rep_2530_c_3 | Rep_2530_c_3_212 | 237328 | 238380 | + | 9.B.18.2.1 |
Gene ID: Rep_2530_c_3_207
Type: TC
Location: 232085 - 233698 (+)
Type: TC
Location: 232085 - 233698 (+)
Gene ID: Rep_2530_c_3_208
Type: pfam
Location: 233751 - 234617 (-)
Type: pfam
Location: 233751 - 234617 (-)
Gene ID: Rep_2530_c_3_209
Type: CAZyme
Location: 234750 - 235940 (+)
Type: CAZyme
Location: 234750 - 235940 (+)
Gene ID: Rep_2530_c_3_210
Type:
Location: 235940 - 236197 (+)
Type:
Location: 235940 - 236197 (+)
Gene ID: Rep_2530_c_3_211
Type: CAZyme
Location: 236143 - 237045 (+)
Type: CAZyme
Location: 236143 - 237045 (+)
Gene ID: Rep_2530_c_3_212
Type: TC
Location: 237328 - 238380 (+)
Type: TC
Location: 237328 - 238380 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-917
Genus
HGM11377
Species
HGM11377 sp900755035
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.