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Cluster: Rep_2530_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2530_c_3 Rep_2530_c_3_119 138183 139325 + GH43_3
CAZyme Rep_2530_c_3 Rep_2530_c_3_120 139345 140505 + GH43_3
NULL(UNKNOWN) Rep_2530_c_3 Rep_2530_c_3_121 140524 142017 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_2530_c_3 Rep_2530_c_3_122 142038 143015 + 3.A.1.1.20
TC Rep_2530_c_3 Rep_2530_c_3_123 142978 143871 + 3.A.1.1.36
TC Rep_2530_c_3 Rep_2530_c_3_124 143882 145321 + 3.A.1.1.26
pfam Rep_2530_c_3 Rep_2530_c_3_125 145339 147165 + Big_2 | Big_2
pfam Rep_2530_c_3 Rep_2530_c_3_126 147181 148905 + Big_2 | Big_2 | Big-like
CAZyme Rep_2530_c_3 Rep_2530_c_3_127 148972 151143 + GH36
CAZyme Rep_2530_c_3 Rep_2530_c_3_128 151140 152018 + GH43_17
Gene ID: Rep_2530_c_3_119
Type: CAZyme
Location: 138183 - 139325 (+)
Gene ID: Rep_2530_c_3_120
Type: CAZyme
Location: 139345 - 140505 (+)
Gene ID: Rep_2530_c_3_121
Type:
Location: 140524 - 142017 (+)
Gene ID: Rep_2530_c_3_122
Type: TC
Location: 142038 - 143015 (+)
Gene ID: Rep_2530_c_3_123
Type: TC
Location: 142978 - 143871 (+)
Gene ID: Rep_2530_c_3_124
Type: TC
Location: 143882 - 145321 (+)
Gene ID: Rep_2530_c_3_125
Type: pfam
Location: 145339 - 147165 (+)
Gene ID: Rep_2530_c_3_126
Type: pfam
Location: 147181 - 148905 (+)
Gene ID: Rep_2530_c_3_127
Type: CAZyme
Location: 148972 - 151143 (+)
Gene ID: Rep_2530_c_3_128
Type: CAZyme
Location: 151140 - 152018 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Christensenellales
→
Family
CAG-917
→
Genus
HGM11377
→
Species
HGM11377 sp900755035

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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