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Cluster: Rep_252_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_252_c_13 Rep_252_c_13_33 33059 34360 - GH43_3
CAZyme Rep_252_c_13 Rep_252_c_13_34 34367 38488 - GH76
NULL(UNKNOWN) Rep_252_c_13 Rep_252_c_13_35 38710 41529 + NULL(UNKNOWN)
[View Structural Homologs]
TF Rep_252_c_13 Rep_252_c_13_36 41648 45607 + HTH_AraC | HTH_AraC
CAZyme Rep_252_c_13 Rep_252_c_13_37 45626 46639 - GH43_26
sulfatase Rep_252_c_13 Rep_252_c_13_38 46928 49441 + S1_4
pfam Rep_252_c_13 Rep_252_c_13_39 49468 50955 + TIG
TC Rep_252_c_13 Rep_252_c_13_40 50968 54051 + 1.B.14.6.1
pfam Rep_252_c_13 Rep_252_c_13_41 54083 56158 + SusD_RagB | SusD-like_3
pfam Rep_252_c_13 Rep_252_c_13_42 56179 57228 + BT_3987-like_N | BT_3044-like_C | DUF4973
TC Rep_252_c_13 Rep_252_c_13_43 57432 57851 - 1.A.22.1.1
pfam Rep_252_c_13 Rep_252_c_13_44 58109 59179 + Gp_dh_N | Gp_dh_N | Gp_dh_C
pfam Rep_252_c_13 Rep_252_c_13_45 59273 60199 + IPPT | IPT
CAZyme Rep_252_c_13 Rep_252_c_13_46 60346 62307 + GH133
CAZyme Rep_252_c_13 Rep_252_c_13_47 62319 63575 + GT4
CAZyme Rep_252_c_13 Rep_252_c_13_48 63623 65074 + GH57
NULL(UNKNOWN) Rep_252_c_13 Rep_252_c_13_49 65281 65427 + NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_252_c_13 Rep_252_c_13_50 65432 66097 + Ribul_P_3_epim
CAZyme Rep_252_c_13 Rep_252_c_13_51 66124 68721 - GT51
pfam Rep_252_c_13 Rep_252_c_13_52 68949 69737 - Hexapep | Hexapep | Acetyltransf_11
TC Rep_252_c_13 Rep_252_c_13_53 69841 71244 - 1.B.17.3.5
TC Rep_252_c_13 Rep_252_c_13_54 71252 74581 - 2.A.6.2.22
TC Rep_252_c_13 Rep_252_c_13_55 74626 75825 - 2.A.6.2.46
STP Rep_252_c_13 Rep_252_c_13_56 76022 77464 - HD
TC Rep_252_c_13 Rep_252_c_13_57 77861 80461 + 1.B.18.3.5
TC Rep_252_c_13 Rep_252_c_13_58 80826 82175 + 2.A.66.10.1
CAZyme Rep_252_c_13 Rep_252_c_13_59 82179 83438 + GT2
Gene ID: Rep_252_c_13_33
Type: CAZyme
Location: 33059 - 34360 (-)
Gene ID: Rep_252_c_13_34
Type: CAZyme
Location: 34367 - 38488 (-)
Gene ID: Rep_252_c_13_35
Type:
Location: 38710 - 41529 (+)
Gene ID: Rep_252_c_13_36
Type: TF
Location: 41648 - 45607 (+)
Gene ID: Rep_252_c_13_37
Type: CAZyme
Location: 45626 - 46639 (-)
Gene ID: Rep_252_c_13_38
Type: sulfatase
Location: 46928 - 49441 (+)
Gene ID: Rep_252_c_13_39
Type: pfam
Location: 49468 - 50955 (+)
Gene ID: Rep_252_c_13_40
Type: TC
Location: 50968 - 54051 (+)
Gene ID: Rep_252_c_13_41
Type: pfam
Location: 54083 - 56158 (+)
Gene ID: Rep_252_c_13_42
Type: pfam
Location: 56179 - 57228 (+)
Gene ID: Rep_252_c_13_43
Type: TC
Location: 57432 - 57851 (-)
Gene ID: Rep_252_c_13_44
Type: pfam
Location: 58109 - 59179 (+)
Gene ID: Rep_252_c_13_45
Type: pfam
Location: 59273 - 60199 (+)
Gene ID: Rep_252_c_13_46
Type: CAZyme
Location: 60346 - 62307 (+)
Gene ID: Rep_252_c_13_47
Type: CAZyme
Location: 62319 - 63575 (+)
Gene ID: Rep_252_c_13_48
Type: CAZyme
Location: 63623 - 65074 (+)
Gene ID: Rep_252_c_13_49
Type:
Location: 65281 - 65427 (+)
Gene ID: Rep_252_c_13_50
Type: pfam
Location: 65432 - 66097 (+)
Gene ID: Rep_252_c_13_51
Type: CAZyme
Location: 66124 - 68721 (-)
Gene ID: Rep_252_c_13_52
Type: pfam
Location: 68949 - 69737 (-)
Gene ID: Rep_252_c_13_53
Type: TC
Location: 69841 - 71244 (-)
Gene ID: Rep_252_c_13_54
Type: TC
Location: 71252 - 74581 (-)
Gene ID: Rep_252_c_13_55
Type: TC
Location: 74626 - 75825 (-)
Gene ID: Rep_252_c_13_56
Type: STP
Location: 76022 - 77464 (-)
Gene ID: Rep_252_c_13_57
Type: TC
Location: 77861 - 80461 (+)
Gene ID: Rep_252_c_13_58
Type: TC
Location: 80826 - 82175 (+)
Gene ID: Rep_252_c_13_59
Type: CAZyme
Location: 82179 - 83438 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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