dbCAN Logo

Cluster: Rep_252_CGC48

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_252_c_164 Rep_252_c_164_2 1700 4780 - 1.B.14.6.1
CAZyme Rep_252_c_164 Rep_252_c_164_3 4905 6989 - GH35
CAZyme Rep_252_c_164 Rep_252_c_164_4 7010 9994 + GH2
STP Rep_252_c_164 Rep_252_c_164_5 9997 13302 - TPR_2 | TPR_2
TC Rep_252_c_164 Rep_252_c_164_6 13500 14795 - 2.A.1.1.3
TF Rep_252_c_164 Rep_252_c_164_7 14950 15852 + HTH_AraC | HTH_AraC
TC Rep_252_c_164 Rep_252_c_164_8 15866 16876 - 1.B.42.1.2
TC Rep_252_c_164 Rep_252_c_164_9 16971 17729 + 3.A.1.27.1
TC Rep_252_c_164 Rep_252_c_164_10 17741 18499 + 3.A.1.27.4
Gene ID: Rep_252_c_164_2
Type: TC
Location: 1700 - 4780 (-)
Gene ID: Rep_252_c_164_3
Type: CAZyme
Location: 4905 - 6989 (-)
Gene ID: Rep_252_c_164_4
Type: CAZyme
Location: 7010 - 9994 (+)
Gene ID: Rep_252_c_164_5
Type: STP
Location: 9997 - 13302 (-)
Gene ID: Rep_252_c_164_6
Type: TC
Location: 13500 - 14795 (-)
Gene ID: Rep_252_c_164_7
Type: TF
Location: 14950 - 15852 (+)
Gene ID: Rep_252_c_164_8
Type: TC
Location: 15866 - 16876 (-)
Gene ID: Rep_252_c_164_9
Type: TC
Location: 16971 - 17729 (+)
Gene ID: Rep_252_c_164_10
Type: TC
Location: 17741 - 18499 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List