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Cluster: Rep_252_CGC41

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_252_c_127 Rep_252_c_127_7 8771 9625 + 3.D.6.1.3
TC Rep_252_c_127 Rep_252_c_127_8 9622 10971 + 3.D.6.1.2
TC Rep_252_c_127 Rep_252_c_127_9 11060 12073 + 3.D.6.1.2
TC Rep_252_c_127 Rep_252_c_127_10 12107 12670 + 3.D.6.1.1
TC Rep_252_c_127 Rep_252_c_127_11 12682 13266 + 3.D.6.1.2
TC Rep_252_c_127 Rep_252_c_127_12 13270 13869 + 3.D.6.1.2
TC Rep_252_c_127 Rep_252_c_127_13 13907 15973 - 1.B.6.1.14
TC Rep_252_c_127 Rep_252_c_127_14 16070 17173 - 3.A.1.132.3
CAZyme Rep_252_c_127 Rep_252_c_127_15 17320 19353 + GH115
Gene ID: Rep_252_c_127_7
Type: TC
Location: 8771 - 9625 (+)
Gene ID: Rep_252_c_127_8
Type: TC
Location: 9622 - 10971 (+)
Gene ID: Rep_252_c_127_9
Type: TC
Location: 11060 - 12073 (+)
Gene ID: Rep_252_c_127_10
Type: TC
Location: 12107 - 12670 (+)
Gene ID: Rep_252_c_127_11
Type: TC
Location: 12682 - 13266 (+)
Gene ID: Rep_252_c_127_12
Type: TC
Location: 13270 - 13869 (+)
Gene ID: Rep_252_c_127_13
Type: TC
Location: 13907 - 15973 (-)
Gene ID: Rep_252_c_127_14
Type: TC
Location: 16070 - 17173 (-)
Gene ID: Rep_252_c_127_15
Type: CAZyme
Location: 17320 - 19353 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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