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Cluster: Rep_2523_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2523_c_56 Rep_2523_c_56_1 32 1510 - GH77
peptidase Rep_2523_c_56 Rep_2523_c_56_2 1629 3011 - M18.UPW
TC Rep_2523_c_56 Rep_2523_c_56_3 3392 4756 - 2.A.66.1.33
peptidase Rep_2523_c_56 Rep_2523_c_56_4 5201 6241 + M42.UNW
TC Rep_2523_c_56 Rep_2523_c_56_5 6258 6845 + 2.A.107.1.2
Gene ID: Rep_2523_c_56_1
Type: CAZyme
Location: 32 - 1510 (-)
Gene ID: Rep_2523_c_56_2
Type: peptidase
Location: 1629 - 3011 (-)
Gene ID: Rep_2523_c_56_3
Type: TC
Location: 3392 - 4756 (-)
Gene ID: Rep_2523_c_56_4
Type: peptidase
Location: 5201 - 6241 (+)
Gene ID: Rep_2523_c_56_5
Type: TC
Location: 6258 - 6845 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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