Cluster: Rep_2523_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: Rep_2523
- CGC Family ID: CGCFAM_00106
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2523_c_33 | Rep_2523_c_33_3 | 2394 | 3503 | + | GH53 |
| pfam | Rep_2523_c_33 | Rep_2523_c_33_4 | 4296 | 5828 | + | SBP_bac_8 |
| TC | Rep_2523_c_33 | Rep_2523_c_33_5 | 5954 | 7507 | + | 3.A.1.1.27 |
| TC | Rep_2523_c_33 | Rep_2523_c_33_6 | 7504 | 8529 | + | 3.A.1.1.27 |
| TC | Rep_2523_c_33 | Rep_2523_c_33_7 | 8541 | 9671 | + | 3.A.1.1.26 |
| CAZyme | Rep_2523_c_33 | Rep_2523_c_33_8 | 10038 | 11645 | - | GH13_36 |
Gene ID: Rep_2523_c_33_3
Type: CAZyme
Location: 2394 - 3503 (+)
Type: CAZyme
Location: 2394 - 3503 (+)
Gene ID: Rep_2523_c_33_4
Type: pfam
Location: 4296 - 5828 (+)
Type: pfam
Location: 4296 - 5828 (+)
Gene ID: Rep_2523_c_33_5
Type: TC
Location: 5954 - 7507 (+)
Type: TC
Location: 5954 - 7507 (+)
Gene ID: Rep_2523_c_33_6
Type: TC
Location: 7504 - 8529 (+)
Type: TC
Location: 7504 - 8529 (+)
Gene ID: Rep_2523_c_33_7
Type: TC
Location: 8541 - 9671 (+)
Type: TC
Location: 8541 - 9671 (+)
Gene ID: Rep_2523_c_33_8
Type: CAZyme
Location: 10038 - 11645 (-)
Type: CAZyme
Location: 10038 - 11645 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
UBA4636
Species
UBA4636 sp944363645
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.