Cluster: Rep_2523_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2523
- CGC Family ID: CGCFAM_01320
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2523_c_18 | Rep_2523_c_18_8 | 7782 | 8840 | + | 3.A.1.1.22 |
| NULL(UNKNOWN) | Rep_2523_c_18 | Rep_2523_c_18_9 | 8852 | 9541 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | Rep_2523_c_18 | Rep_2523_c_18_10 | 9704 | 10333 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_2523_c_18 | Rep_2523_c_18_11 | 10350 | 11894 | + | GH28 |
| CAZyme | Rep_2523_c_18 | Rep_2523_c_18_12 | 11897 | 13021 | + | GH105 |
| TC | Rep_2523_c_18 | Rep_2523_c_18_13 | 13152 | 14258 | + | 3.B.1.1.6 |
Gene ID: Rep_2523_c_18_8
Type: TC
Location: 7782 - 8840 (+)
Type: TC
Location: 7782 - 8840 (+)
Gene ID: Rep_2523_c_18_9
Type:
Location: 8852 - 9541 (+)
Type:
Location: 8852 - 9541 (+)
Gene ID: Rep_2523_c_18_10
Type:
Location: 9704 - 10333 (+)
Type:
Location: 9704 - 10333 (+)
Gene ID: Rep_2523_c_18_11
Type: CAZyme
Location: 10350 - 11894 (+)
Type: CAZyme
Location: 10350 - 11894 (+)
Gene ID: Rep_2523_c_18_12
Type: CAZyme
Location: 11897 - 13021 (+)
Type: CAZyme
Location: 11897 - 13021 (+)
Gene ID: Rep_2523_c_18_13
Type: TC
Location: 13152 - 14258 (+)
Type: TC
Location: 13152 - 14258 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
UBA4636
Species
UBA4636 sp944363645
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.