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Cluster: Rep_251_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_251_c_75 Rep_251_c_75_2 69 1502 - 2.A.21.3.7
pfam Rep_251_c_75 Rep_251_c_75_3 1607 2722 + Epimerase_2
NULL(UNKNOWN) Rep_251_c_75 Rep_251_c_75_4 2930 4072 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_251_c_75 Rep_251_c_75_5 4268 4942 - 9.B.18.1.3
NULL(UNKNOWN) Rep_251_c_75 Rep_251_c_75_6 5187 6746 + NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_251_c_75 Rep_251_c_75_7 6746 7183 + Lipocalin_8
CAZyme Rep_251_c_75 Rep_251_c_75_8 7252 8376 + GT4
pfam Rep_251_c_75 Rep_251_c_75_9 8433 8966 + Thioredox_DsbH | Thioredoxin_2
peptidase Rep_251_c_75 Rep_251_c_75_10 9192 11378 + S08.UPA
TC Rep_251_c_75 Rep_251_c_75_11 11673 12626 - 8.A.21.2.2
Gene ID: Rep_251_c_75_2
Type: TC
Location: 69 - 1502 (-)
Gene ID: Rep_251_c_75_3
Type: pfam
Location: 1607 - 2722 (+)
Gene ID: Rep_251_c_75_4
Type:
Location: 2930 - 4072 (-)
Gene ID: Rep_251_c_75_5
Type: TC
Location: 4268 - 4942 (-)
Gene ID: Rep_251_c_75_6
Type:
Location: 5187 - 6746 (+)
Gene ID: Rep_251_c_75_7
Type: pfam
Location: 6746 - 7183 (+)
Gene ID: Rep_251_c_75_8
Type: CAZyme
Location: 7252 - 8376 (+)
Gene ID: Rep_251_c_75_9
Type: pfam
Location: 8433 - 8966 (+)
Gene ID: Rep_251_c_75_10
Type: peptidase
Location: 9192 - 11378 (+)
Gene ID: Rep_251_c_75_11
Type: TC
Location: 11673 - 12626 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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