Cluster: Rep_251_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate: host glycan
- Genome ID: Rep_251
- CGC Family ID: CGCFAM_00376
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_251_c_74 | Rep_251_c_74_2 | 104 | 2275 | - | 3.A.1.112.9 |
| CAZyme | Rep_251_c_74 | Rep_251_c_74_3 | 2566 | 6354 | + | GH85 |
| TC | Rep_251_c_74 | Rep_251_c_74_4 | 6376 | 9780 | + | 1.B.14.6.13 |
| NULL(UNKNOWN) | Rep_251_c_74 | Rep_251_c_74_5 | 9802 | 9975 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_251_c_74 | Rep_251_c_74_6 | 10022 | 13579 | + | GH85 |
| TC | Rep_251_c_74 | Rep_251_c_74_7 | 13735 | 15723 | + | 8.A.46.2.2 |
Gene ID: Rep_251_c_74_2
Type: TC
Location: 104 - 2275 (-)
Type: TC
Location: 104 - 2275 (-)
Gene ID: Rep_251_c_74_3
Type: CAZyme
Location: 2566 - 6354 (+)
Type: CAZyme
Location: 2566 - 6354 (+)
Gene ID: Rep_251_c_74_4
Type: TC
Location: 6376 - 9780 (+)
Type: TC
Location: 6376 - 9780 (+)
Gene ID: Rep_251_c_74_5
Type:
Location: 9802 - 9975 (+)
Type:
Location: 9802 - 9975 (+)
Gene ID: Rep_251_c_74_6
Type: CAZyme
Location: 10022 - 13579 (+)
Type: CAZyme
Location: 10022 - 13579 (+)
Gene ID: Rep_251_c_74_7
Type: TC
Location: 13735 - 15723 (+)
Type: TC
Location: 13735 - 15723 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900322095
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.