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Cluster: Rep_251_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_251_c_100 Rep_251_c_100_4 3773 4558 + 9.B.14.3.3
pfam Rep_251_c_100 Rep_251_c_100_5 4881 6512 - DUF6377
TC Rep_251_c_100 Rep_251_c_100_6 6730 9729 + 1.B.14.6.1
TC Rep_251_c_100 Rep_251_c_100_7 9741 11234 + 8.A.46.1.3
pfam Rep_251_c_100 Rep_251_c_100_8 11330 12820 + SusE | SusF_SusE | SusF_SusE
CAZyme Rep_251_c_100 Rep_251_c_100_9 12836 14584 + GH66
CAZyme Rep_251_c_100 Rep_251_c_100_10 14594 16753 + GH97
Gene ID: Rep_251_c_100_4
Type: TC
Location: 3773 - 4558 (+)
Gene ID: Rep_251_c_100_5
Type: pfam
Location: 4881 - 6512 (-)
Gene ID: Rep_251_c_100_6
Type: TC
Location: 6730 - 9729 (+)
Gene ID: Rep_251_c_100_7
Type: TC
Location: 9741 - 11234 (+)
Gene ID: Rep_251_c_100_8
Type: pfam
Location: 11330 - 12820 (+)
Gene ID: Rep_251_c_100_9
Type: CAZyme
Location: 12836 - 14584 (+)
Gene ID: Rep_251_c_100_10
Type: CAZyme
Location: 14594 - 16753 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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