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Cluster: Rep_251_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_251_c_98 Rep_251_c_98_4 4158 5549 + CE11
pfam Rep_251_c_98 Rep_251_c_98_5 5559 6329 + Acetyltransf_11
pfam Rep_251_c_98 Rep_251_c_98_6 6333 7268 + IPPT | IPT
CAZyme Rep_251_c_98 Rep_251_c_98_7 7323 9851 + GT51
pfam Rep_251_c_98 Rep_251_c_98_8 10114 11835 + tRNA-synt_1c | tRNA-synt_1c_C | tRNA-synt_1c_C2
pfam Rep_251_c_98 Rep_251_c_98_9 11856 13262 + TPR_8 | TPR_8
TC Rep_251_c_98 Rep_251_c_98_10 13278 13922 + 9.B.27.2.5
Gene ID: Rep_251_c_98_4
Type: CAZyme
Location: 4158 - 5549 (+)
Gene ID: Rep_251_c_98_5
Type: pfam
Location: 5559 - 6329 (+)
Gene ID: Rep_251_c_98_6
Type: pfam
Location: 6333 - 7268 (+)
Gene ID: Rep_251_c_98_7
Type: CAZyme
Location: 7323 - 9851 (+)
Gene ID: Rep_251_c_98_8
Type: pfam
Location: 10114 - 11835 (+)
Gene ID: Rep_251_c_98_9
Type: pfam
Location: 11856 - 13262 (+)
Gene ID: Rep_251_c_98_10
Type: TC
Location: 13278 - 13922 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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