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Cluster: Rep_251_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_251_c_34 Rep_251_c_34_3 2606 2848 - 3.D.1.6.4
pfam Rep_251_c_34 Rep_251_c_34_4 3105 3710 + DUF4254
CAZyme Rep_251_c_34 Rep_251_c_34_5 3737 4795 + GT9
pfam Rep_251_c_34 Rep_251_c_34_6 4906 5673 - Arginase
TC Rep_251_c_34 Rep_251_c_34_7 5807 6439 - 2.A.123.4.1
CAZyme Rep_251_c_34 Rep_251_c_34_8 6448 7176 - GT2
CAZyme Rep_251_c_34 Rep_251_c_34_9 7298 8749 - GT83
STP Rep_251_c_34 Rep_251_c_34_10 8793 9617 - PfkB
STP Rep_251_c_34 Rep_251_c_34_11 9689 10564 - PfkB
TC Rep_251_c_34 Rep_251_c_34_12 10597 12255 - 2.A.81.1.2
Gene ID: Rep_251_c_34_3
Type: TC
Location: 2606 - 2848 (-)
Gene ID: Rep_251_c_34_4
Type: pfam
Location: 3105 - 3710 (+)
Gene ID: Rep_251_c_34_5
Type: CAZyme
Location: 3737 - 4795 (+)
Gene ID: Rep_251_c_34_6
Type: pfam
Location: 4906 - 5673 (-)
Gene ID: Rep_251_c_34_7
Type: TC
Location: 5807 - 6439 (-)
Gene ID: Rep_251_c_34_8
Type: CAZyme
Location: 6448 - 7176 (-)
Gene ID: Rep_251_c_34_9
Type: CAZyme
Location: 7298 - 8749 (-)
Gene ID: Rep_251_c_34_10
Type: STP
Location: 8793 - 9617 (-)
Gene ID: Rep_251_c_34_11
Type: STP
Location: 9689 - 10564 (-)
Gene ID: Rep_251_c_34_12
Type: TC
Location: 10597 - 12255 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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