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Cluster: Rep_2519_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2519_c_4 Rep_2519_c_4_30 30453 31247 - CE4
TC Rep_2519_c_4 Rep_2519_c_4_31 31335 33239 + 3.A.1.121.4
pfam Rep_2519_c_4 Rep_2519_c_4_32 33358 34221 + F_bP_aldolase
CAZyme Rep_2519_c_4 Rep_2519_c_4_33 34323 35873 - GH31_19
TF Rep_2519_c_4 Rep_2519_c_4_34 36061 36873 + HTH_AraC
pfam Rep_2519_c_4 Rep_2519_c_4_35 36870 37157 + DUF1294
TC Rep_2519_c_4 Rep_2519_c_4_36 37191 37529 - 2.A.7.34.4
pfam Rep_2519_c_4 Rep_2519_c_4_37 37627 38184 - tRNA_edit
TC Rep_2519_c_4 Rep_2519_c_4_38 38196 39932 - 2.A.58.2.2
TC Rep_2519_c_4 Rep_2519_c_4_39 40203 41954 - 2.A.58.2.2
TC Rep_2519_c_4 Rep_2519_c_4_40 42123 43484 + 2.A.66.1.32
Gene ID: Rep_2519_c_4_30
Type: CAZyme
Location: 30453 - 31247 (-)
Gene ID: Rep_2519_c_4_31
Type: TC
Location: 31335 - 33239 (+)
Gene ID: Rep_2519_c_4_32
Type: pfam
Location: 33358 - 34221 (+)
Gene ID: Rep_2519_c_4_33
Type: CAZyme
Location: 34323 - 35873 (-)
Gene ID: Rep_2519_c_4_34
Type: TF
Location: 36061 - 36873 (+)
Gene ID: Rep_2519_c_4_35
Type: pfam
Location: 36870 - 37157 (+)
Gene ID: Rep_2519_c_4_36
Type: TC
Location: 37191 - 37529 (-)
Gene ID: Rep_2519_c_4_37
Type: pfam
Location: 37627 - 38184 (-)
Gene ID: Rep_2519_c_4_38
Type: TC
Location: 38196 - 39932 (-)
Gene ID: Rep_2519_c_4_39
Type: TC
Location: 40203 - 41954 (-)
Gene ID: Rep_2519_c_4_40
Type: TC
Location: 42123 - 43484 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
RGIG6154
→
Family
RGIG6154
→
Genus
RGIG6154
→
Species
RGIG6154 sp934457515

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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