Cluster: Rep_2519_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2519
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2519_c_4 | Rep_2519_c_4_2 | 232 | 1233 | - | 9.A.11.1.1 |
| TC | Rep_2519_c_4 | Rep_2519_c_4_3 | 1247 | 1690 | - | 9.A.11.1.1 |
| pfam | Rep_2519_c_4 | Rep_2519_c_4_4 | 1813 | 2946 | - | Cu_amine_oxidN1 | Laminin_G_3 |
| STP | Rep_2519_c_4 | Rep_2519_c_4_5 | 3114 | 3917 | + | HhH-GPD |
| CAZyme | Rep_2519_c_4 | Rep_2519_c_4_6 | 3987 | 5138 | + | GH27 |
Gene ID: Rep_2519_c_4_2
Type: TC
Location: 232 - 1233 (-)
Type: TC
Location: 232 - 1233 (-)
Gene ID: Rep_2519_c_4_3
Type: TC
Location: 1247 - 1690 (-)
Type: TC
Location: 1247 - 1690 (-)
Gene ID: Rep_2519_c_4_4
Type: pfam
Location: 1813 - 2946 (-)
Type: pfam
Location: 1813 - 2946 (-)
Gene ID: Rep_2519_c_4_5
Type: STP
Location: 3114 - 3917 (+)
Type: STP
Location: 3114 - 3917 (+)
Gene ID: Rep_2519_c_4_6
Type: CAZyme
Location: 3987 - 5138 (+)
Type: CAZyme
Location: 3987 - 5138 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
RGIG6154
Family
RGIG6154
Genus
RGIG6154
Species
RGIG6154 sp934457515
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.