Cluster: Rep_2519_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2519
- CGC Family ID: CGCFAM_00527
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2519_c_1 | Rep_2519_c_1_38 | 40083 | 40814 | - | 3.A.1.3.25 |
| TC | Rep_2519_c_1 | Rep_2519_c_1_39 | 40798 | 41487 | - | 3.A.1.3.25 |
| TC | Rep_2519_c_1 | Rep_2519_c_1_40 | 41600 | 42361 | - | 3.A.1.3.25 |
| TF | Rep_2519_c_1 | Rep_2519_c_1_41 | 42764 | 43063 | - | HTH_3 |
| CAZyme | Rep_2519_c_1 | Rep_2519_c_1_42 | 43333 | 44235 | + | GH16_3 |
Gene ID: Rep_2519_c_1_38
Type: TC
Location: 40083 - 40814 (-)
Type: TC
Location: 40083 - 40814 (-)
Gene ID: Rep_2519_c_1_39
Type: TC
Location: 40798 - 41487 (-)
Type: TC
Location: 40798 - 41487 (-)
Gene ID: Rep_2519_c_1_40
Type: TC
Location: 41600 - 42361 (-)
Type: TC
Location: 41600 - 42361 (-)
Gene ID: Rep_2519_c_1_41
Type: TF
Location: 42764 - 43063 (-)
Type: TF
Location: 42764 - 43063 (-)
Gene ID: Rep_2519_c_1_42
Type: CAZyme
Location: 43333 - 44235 (+)
Type: CAZyme
Location: 43333 - 44235 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
RGIG6154
Family
RGIG6154
Genus
RGIG6154
Species
RGIG6154 sp934457515
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.