Cluster: Rep_2519_CGC23
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2519
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2519_c_81 | Rep_2519_c_81_1 | 158 | 1000 | - | 2.A.115.1.2 |
| pfam | Rep_2519_c_81 | Rep_2519_c_81_2 | 1223 | 2128 | + | LytR_cpsA_psr |
| CAZyme | Rep_2519_c_81 | Rep_2519_c_81_3 | 2296 | 4605 | - | CE17 |
Gene ID: Rep_2519_c_81_1
Type: TC
Location: 158 - 1000 (-)
Type: TC
Location: 158 - 1000 (-)
Gene ID: Rep_2519_c_81_2
Type: pfam
Location: 1223 - 2128 (+)
Type: pfam
Location: 1223 - 2128 (+)
Gene ID: Rep_2519_c_81_3
Type: CAZyme
Location: 2296 - 4605 (-)
Type: CAZyme
Location: 2296 - 4605 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
RGIG6154
Family
RGIG6154
Genus
RGIG6154
Species
RGIG6154 sp934457515
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.