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Cluster: Rep_2519_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2519_c_0 Rep_2519_c_0_81 93239 94207 - CE2
CAZyme Rep_2519_c_0 Rep_2519_c_0_82 94361 96499 + CBM67 | GH78
NULL(UNKNOWN) Rep_2519_c_0 Rep_2519_c_0_83 96763 97041 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_2519_c_0 Rep_2519_c_0_84 97248 98450 + 3.A.1.4.10
TC Rep_2519_c_0 Rep_2519_c_0_85 98618 99499 + 3.A.1.4.10
TC Rep_2519_c_0 Rep_2519_c_0_86 99508 100581 + 3.A.1.4.8
TC Rep_2519_c_0 Rep_2519_c_0_87 100583 101419 + 3.A.1.4.10
TC Rep_2519_c_0 Rep_2519_c_0_88 101419 102117 + 3.A.1.4.10
sulfatase Rep_2519_c_0 Rep_2519_c_0_89 102430 107001 + S1_8
NULL(UNKNOWN) Rep_2519_c_0 Rep_2519_c_0_90 107046 108959 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_2519_c_0 Rep_2519_c_0_91 109048 112080 - GH38
pfam Rep_2519_c_0 Rep_2519_c_0_92 112318 112737 + Sod_Cu
CAZyme Rep_2519_c_0 Rep_2519_c_0_93 112890 115937 + GH16
sulfatase Rep_2519_c_0 Rep_2519_c_0_94 116029 117051 + S1_4
STP Rep_2519_c_0 Rep_2519_c_0_95 117099 118124 - HhH-GPD
TC Rep_2519_c_0 Rep_2519_c_0_96 118273 119595 + 2.A.37.2.2
NULL(UNKNOWN) Rep_2519_c_0 Rep_2519_c_0_97 119900 120202 + NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_2519_c_0 Rep_2519_c_0_98 120216 121244 + vATP-synt_AC39
TC Rep_2519_c_0 Rep_2519_c_0_99 121257 123083 + 3.A.2.3.3
Gene ID: Rep_2519_c_0_81
Type: CAZyme
Location: 93239 - 94207 (-)
Gene ID: Rep_2519_c_0_82
Type: CAZyme
Location: 94361 - 96499 (+)
Gene ID: Rep_2519_c_0_83
Type:
Location: 96763 - 97041 (+)
Gene ID: Rep_2519_c_0_84
Type: TC
Location: 97248 - 98450 (+)
Gene ID: Rep_2519_c_0_85
Type: TC
Location: 98618 - 99499 (+)
Gene ID: Rep_2519_c_0_86
Type: TC
Location: 99508 - 100581 (+)
Gene ID: Rep_2519_c_0_87
Type: TC
Location: 100583 - 101419 (+)
Gene ID: Rep_2519_c_0_88
Type: TC
Location: 101419 - 102117 (+)
Gene ID: Rep_2519_c_0_89
Type: sulfatase
Location: 102430 - 107001 (+)
Gene ID: Rep_2519_c_0_90
Type:
Location: 107046 - 108959 (-)
Gene ID: Rep_2519_c_0_91
Type: CAZyme
Location: 109048 - 112080 (-)
Gene ID: Rep_2519_c_0_92
Type: pfam
Location: 112318 - 112737 (+)
Gene ID: Rep_2519_c_0_93
Type: CAZyme
Location: 112890 - 115937 (+)
Gene ID: Rep_2519_c_0_94
Type: sulfatase
Location: 116029 - 117051 (+)
Gene ID: Rep_2519_c_0_95
Type: STP
Location: 117099 - 118124 (-)
Gene ID: Rep_2519_c_0_96
Type: TC
Location: 118273 - 119595 (+)
Gene ID: Rep_2519_c_0_97
Type:
Location: 119900 - 120202 (+)
Gene ID: Rep_2519_c_0_98
Type: pfam
Location: 120216 - 121244 (+)
Gene ID: Rep_2519_c_0_99
Type: TC
Location: 121257 - 123083 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
RGIG6154
→
Family
RGIG6154
→
Genus
RGIG6154
→
Species
RGIG6154 sp934457515

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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