Cluster: Rep_2519_CGC19
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2519
- CGC Family ID: CGCFAM_00085
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2519_c_43 | Rep_2519_c_43_1 | 275 | 832 | - | 2.A.87.1.3 |
| pfam | Rep_2519_c_43 | Rep_2519_c_43_2 | 1065 | 1532 | - | DUF4330 |
| pfam | Rep_2519_c_43 | Rep_2519_c_43_3 | 1532 | 2011 | - | DUF4330 |
| CAZyme | Rep_2519_c_43 | Rep_2519_c_43_4 | 2008 | 3129 | - | GT4 |
| TC | Rep_2519_c_43 | Rep_2519_c_43_5 | 3122 | 4987 | - | 9.B.67.1.1 |
| TC | Rep_2519_c_43 | Rep_2519_c_43_6 | 4974 | 6536 | - | 2.A.66.4.5 |
Gene ID: Rep_2519_c_43_1
Type: TC
Location: 275 - 832 (-)
Type: TC
Location: 275 - 832 (-)
Gene ID: Rep_2519_c_43_2
Type: pfam
Location: 1065 - 1532 (-)
Type: pfam
Location: 1065 - 1532 (-)
Gene ID: Rep_2519_c_43_3
Type: pfam
Location: 1532 - 2011 (-)
Type: pfam
Location: 1532 - 2011 (-)
Gene ID: Rep_2519_c_43_4
Type: CAZyme
Location: 2008 - 3129 (-)
Type: CAZyme
Location: 2008 - 3129 (-)
Gene ID: Rep_2519_c_43_5
Type: TC
Location: 3122 - 4987 (-)
Type: TC
Location: 3122 - 4987 (-)
Gene ID: Rep_2519_c_43_6
Type: TC
Location: 4974 - 6536 (-)
Type: TC
Location: 4974 - 6536 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
RGIG6154
Family
RGIG6154
Genus
RGIG6154
Species
RGIG6154 sp934457515
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.