Cluster: Rep_2519_CGC18
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2519
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2519_c_42 | Rep_2519_c_42_8 | 4781 | 6382 | + | GH110 |
| TF | Rep_2519_c_42 | Rep_2519_c_42_9 | 6396 | 7322 | + | HTH_1 |
| TC | Rep_2519_c_42 | Rep_2519_c_42_10 | 7539 | 8390 | + | 3.A.1.24.5 |
| TC | Rep_2519_c_42 | Rep_2519_c_42_11 | 8460 | 9458 | + | 3.A.1.24.1 |
| TC | Rep_2519_c_42 | Rep_2519_c_42_12 | 9462 | 10166 | + | 3.A.1.24.5 |
Gene ID: Rep_2519_c_42_8
Type: CAZyme
Location: 4781 - 6382 (+)
Type: CAZyme
Location: 4781 - 6382 (+)
Gene ID: Rep_2519_c_42_9
Type: TF
Location: 6396 - 7322 (+)
Type: TF
Location: 6396 - 7322 (+)
Gene ID: Rep_2519_c_42_10
Type: TC
Location: 7539 - 8390 (+)
Type: TC
Location: 7539 - 8390 (+)
Gene ID: Rep_2519_c_42_11
Type: TC
Location: 8460 - 9458 (+)
Type: TC
Location: 8460 - 9458 (+)
Gene ID: Rep_2519_c_42_12
Type: TC
Location: 9462 - 10166 (+)
Type: TC
Location: 9462 - 10166 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
RGIG6154
Family
RGIG6154
Genus
RGIG6154
Species
RGIG6154 sp934457515
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.