Cluster: Rep_2519_CGC15
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2519
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2519_c_27 | Rep_2519_c_27_9 | 9182 | 11395 | + | GT4 |
| pfam | Rep_2519_c_27 | Rep_2519_c_27_10 | 11399 | 11809 | + | RuvX |
| TC | Rep_2519_c_27 | Rep_2519_c_27_11 | 12223 | 13032 | - | 3.A.1.15.2 |
| TC | Rep_2519_c_27 | Rep_2519_c_27_12 | 13029 | 13730 | - | 3.A.1.15.4 |
| TC | Rep_2519_c_27 | Rep_2519_c_27_13 | 13730 | 14710 | - | 3.A.1.15.11 |
Gene ID: Rep_2519_c_27_9
Type: CAZyme
Location: 9182 - 11395 (+)
Type: CAZyme
Location: 9182 - 11395 (+)
Gene ID: Rep_2519_c_27_10
Type: pfam
Location: 11399 - 11809 (+)
Type: pfam
Location: 11399 - 11809 (+)
Gene ID: Rep_2519_c_27_11
Type: TC
Location: 12223 - 13032 (-)
Type: TC
Location: 12223 - 13032 (-)
Gene ID: Rep_2519_c_27_12
Type: TC
Location: 13029 - 13730 (-)
Type: TC
Location: 13029 - 13730 (-)
Gene ID: Rep_2519_c_27_13
Type: TC
Location: 13730 - 14710 (-)
Type: TC
Location: 13730 - 14710 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
RGIG6154
Family
RGIG6154
Genus
RGIG6154
Species
RGIG6154 sp934457515
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.