Cluster: Rep_2519_CGC14
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2519
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2519_c_20 | Rep_2519_c_20_17 | 21080 | 22420 | + | 3.D.6.1.2 |
| TC | Rep_2519_c_20 | Rep_2519_c_20_18 | 22439 | 23362 | + | 3.D.6.1.2 |
| TC | Rep_2519_c_20 | Rep_2519_c_20_19 | 23355 | 23897 | + | 3.D.6.1.2 |
| TC | Rep_2519_c_20 | Rep_2519_c_20_20 | 23894 | 24484 | + | 3.D.6.1.2 |
| TC | Rep_2519_c_20 | Rep_2519_c_20_21 | 24477 | 25064 | + | 3.D.6.1.2 |
| TC | Rep_2519_c_20 | Rep_2519_c_20_22 | 25086 | 25871 | + | 3.D.6.1.3 |
| peptidase | Rep_2519_c_20 | Rep_2519_c_20_23 | 25883 | 27103 | + | S11.004 |
| CAZyme | Rep_2519_c_20 | Rep_2519_c_20_24 | 27154 | 29118 | - | CBM66 | GH28 |
Gene ID: Rep_2519_c_20_17
Type: TC
Location: 21080 - 22420 (+)
Type: TC
Location: 21080 - 22420 (+)
Gene ID: Rep_2519_c_20_18
Type: TC
Location: 22439 - 23362 (+)
Type: TC
Location: 22439 - 23362 (+)
Gene ID: Rep_2519_c_20_19
Type: TC
Location: 23355 - 23897 (+)
Type: TC
Location: 23355 - 23897 (+)
Gene ID: Rep_2519_c_20_20
Type: TC
Location: 23894 - 24484 (+)
Type: TC
Location: 23894 - 24484 (+)
Gene ID: Rep_2519_c_20_21
Type: TC
Location: 24477 - 25064 (+)
Type: TC
Location: 24477 - 25064 (+)
Gene ID: Rep_2519_c_20_22
Type: TC
Location: 25086 - 25871 (+)
Type: TC
Location: 25086 - 25871 (+)
Gene ID: Rep_2519_c_20_23
Type: peptidase
Location: 25883 - 27103 (+)
Type: peptidase
Location: 25883 - 27103 (+)
Gene ID: Rep_2519_c_20_24
Type: CAZyme
Location: 27154 - 29118 (-)
Type: CAZyme
Location: 27154 - 29118 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
RGIG6154
Family
RGIG6154
Genus
RGIG6154
Species
RGIG6154 sp934457515
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.