Cluster: Rep_2519_CGC13
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2519
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2519_c_16 | Rep_2519_c_16_7 | 3323 | 5812 | + | 9.A.8.1.6 |
| pfam | Rep_2519_c_16 | Rep_2519_c_16_8 | 5854 | 6030 | + | FeoB_associated |
| TC | Rep_2519_c_16 | Rep_2519_c_16_9 | 6121 | 6816 | + | 3.A.3.32.7 |
| TC | Rep_2519_c_16 | Rep_2519_c_16_10 | 6813 | 8255 | + | 3.A.3.32.6 |
| TF | Rep_2519_c_16 | Rep_2519_c_16_11 | 8200 | 8568 | + | Fe_dep_repress |
| CAZyme | Rep_2519_c_16 | Rep_2519_c_16_12 | 8898 | 10118 | + | GH109 |
Gene ID: Rep_2519_c_16_7
Type: TC
Location: 3323 - 5812 (+)
Type: TC
Location: 3323 - 5812 (+)
Gene ID: Rep_2519_c_16_8
Type: pfam
Location: 5854 - 6030 (+)
Type: pfam
Location: 5854 - 6030 (+)
Gene ID: Rep_2519_c_16_9
Type: TC
Location: 6121 - 6816 (+)
Type: TC
Location: 6121 - 6816 (+)
Gene ID: Rep_2519_c_16_10
Type: TC
Location: 6813 - 8255 (+)
Type: TC
Location: 6813 - 8255 (+)
Gene ID: Rep_2519_c_16_11
Type: TF
Location: 8200 - 8568 (+)
Type: TF
Location: 8200 - 8568 (+)
Gene ID: Rep_2519_c_16_12
Type: CAZyme
Location: 8898 - 10118 (+)
Type: CAZyme
Location: 8898 - 10118 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
RGIG6154
Family
RGIG6154
Genus
RGIG6154
Species
RGIG6154 sp934457515
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.