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Cluster: Rep_249_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_249_c_106 Rep_249_c_106_32 35536 37551 + GH97
peptidase Rep_249_c_106 Rep_249_c_106_33 37638 40598 - S09.UPW
pfam Rep_249_c_106 Rep_249_c_106_34 40634 42211 - SusD_RagB | SusD-like_3
TC Rep_249_c_106 Rep_249_c_106_35 42244 45312 - 1.B.14.6.1
pfam Rep_249_c_106 Rep_249_c_106_36 45969 47276 - Inos-1-P_synth | NAD_binding_5
TC Rep_249_c_106 Rep_249_c_106_37 47511 49079 - 3.A.11.1.1
pfam Rep_249_c_106 Rep_249_c_106_38 49313 49615 - Thioredoxin_2
TC Rep_249_c_106 Rep_249_c_106_39 49690 50853 - 2.A.23.2.1
TC Rep_249_c_106 Rep_249_c_106_40 51092 51760 - 3.A.1.122.2
Gene ID: Rep_249_c_106_32
Type: CAZyme
Location: 35536 - 37551 (+)
Gene ID: Rep_249_c_106_33
Type: peptidase
Location: 37638 - 40598 (-)
Gene ID: Rep_249_c_106_34
Type: pfam
Location: 40634 - 42211 (-)
Gene ID: Rep_249_c_106_35
Type: TC
Location: 42244 - 45312 (-)
Gene ID: Rep_249_c_106_36
Type: pfam
Location: 45969 - 47276 (-)
Gene ID: Rep_249_c_106_37
Type: TC
Location: 47511 - 49079 (-)
Gene ID: Rep_249_c_106_38
Type: pfam
Location: 49313 - 49615 (-)
Gene ID: Rep_249_c_106_39
Type: TC
Location: 49690 - 50853 (-)
Gene ID: Rep_249_c_106_40
Type: TC
Location: 51092 - 51760 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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