Cluster: Rep_249_CGC2
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_249
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_249_c_5 | Rep_249_c_5_2 | 499 | 1134 | + | 2.A.124.1.4 |
| CAZyme | Rep_249_c_5 | Rep_249_c_5_3 | 1292 | 3118 | - | GH13_46 |
| CAZyme | Rep_249_c_5 | Rep_249_c_5_4 | 3144 | 5000 | - | GH13_14 |
| CAZyme | Rep_249_c_5 | Rep_249_c_5_5 | 5153 | 7294 | - | GH97 |
| CAZyme | Rep_249_c_5 | Rep_249_c_5_6 | 7483 | 10179 | - | GH77 |
| pfam | Rep_249_c_5 | Rep_249_c_5_7 | 10413 | 10985 | - | PAP2 |
| TC | Rep_249_c_5 | Rep_249_c_5_8 | 11105 | 12415 | - | 2.A.2.6.2 |
Gene ID: Rep_249_c_5_2
Type: TC
Location: 499 - 1134 (+)
Type: TC
Location: 499 - 1134 (+)
Gene ID: Rep_249_c_5_3
Type: CAZyme
Location: 1292 - 3118 (-)
Type: CAZyme
Location: 1292 - 3118 (-)
Gene ID: Rep_249_c_5_4
Type: CAZyme
Location: 3144 - 5000 (-)
Type: CAZyme
Location: 3144 - 5000 (-)
Gene ID: Rep_249_c_5_5
Type: CAZyme
Location: 5153 - 7294 (-)
Type: CAZyme
Location: 5153 - 7294 (-)
Gene ID: Rep_249_c_5_6
Type: CAZyme
Location: 7483 - 10179 (-)
Type: CAZyme
Location: 7483 - 10179 (-)
Gene ID: Rep_249_c_5_7
Type: pfam
Location: 10413 - 10985 (-)
Type: pfam
Location: 10413 - 10985 (-)
Gene ID: Rep_249_c_5_8
Type: TC
Location: 11105 - 12415 (-)
Type: TC
Location: 11105 - 12415 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900317685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.