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Cluster: Rep_249_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_249_c_82 Rep_249_c_82_14 17519 19729 - 3.A.10.1.11
NULL(UNKNOWN) Rep_249_c_82 Rep_249_c_82_15 19998 20132 + NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_249_c_82 Rep_249_c_82_16 20544 21353 - Hydrolase | S6PP | Hydrolase_3
CAZyme Rep_249_c_82 Rep_249_c_82_17 21720 24668 + GH31_4
CAZyme Rep_249_c_82 Rep_249_c_82_18 25068 26846 - GH35
CAZyme Rep_249_c_82 Rep_249_c_82_19 26854 29193 - GH3
TF Rep_249_c_82 Rep_249_c_82_20 29357 30271 + HTH_AraC
CAZyme Rep_249_c_82 Rep_249_c_82_21 30286 32616 + GH3
CAZyme Rep_249_c_82 Rep_249_c_82_22 32631 34865 + GH3
CAZyme Rep_249_c_82 Rep_249_c_82_23 34895 37429 + GH3
Gene ID: Rep_249_c_82_14
Type: TC
Location: 17519 - 19729 (-)
Gene ID: Rep_249_c_82_15
Type:
Location: 19998 - 20132 (+)
Gene ID: Rep_249_c_82_16
Type: pfam
Location: 20544 - 21353 (-)
Gene ID: Rep_249_c_82_17
Type: CAZyme
Location: 21720 - 24668 (+)
Gene ID: Rep_249_c_82_18
Type: CAZyme
Location: 25068 - 26846 (-)
Gene ID: Rep_249_c_82_19
Type: CAZyme
Location: 26854 - 29193 (-)
Gene ID: Rep_249_c_82_20
Type: TF
Location: 29357 - 30271 (+)
Gene ID: Rep_249_c_82_21
Type: CAZyme
Location: 30286 - 32616 (+)
Gene ID: Rep_249_c_82_22
Type: CAZyme
Location: 32631 - 34865 (+)
Gene ID: Rep_249_c_82_23
Type: CAZyme
Location: 34895 - 37429 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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