dbCAN Logo

Cluster: Rep_2488_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2488_c_4 Rep_2488_c_4_14 18522 19559 - 9.B.97.6.2
pfam Rep_2488_c_4 Rep_2488_c_4_15 19572 20969 - Wzy_C
CAZyme Rep_2488_c_4 Rep_2488_c_4_16 20988 23381 - GT4
CAZyme Rep_2488_c_4 Rep_2488_c_4_17 23374 24306 - GT2
TC Rep_2488_c_4 Rep_2488_c_4_18 24290 25666 - 9.B.18.1.3
pfam Rep_2488_c_4 Rep_2488_c_4_19 25685 26803 - Epimerase_2
pfam Rep_2488_c_4 Rep_2488_c_4_20 26813 27916 - Epimerase | Polysacc_synt_2 | NAD_binding_4 | Polysacc_synt_C
TC Rep_2488_c_4 Rep_2488_c_4_21 27933 28955 - 9.B.18.2.1
Gene ID: Rep_2488_c_4_14
Type: TC
Location: 18522 - 19559 (-)
Gene ID: Rep_2488_c_4_15
Type: pfam
Location: 19572 - 20969 (-)
Gene ID: Rep_2488_c_4_16
Type: CAZyme
Location: 20988 - 23381 (-)
Gene ID: Rep_2488_c_4_17
Type: CAZyme
Location: 23374 - 24306 (-)
Gene ID: Rep_2488_c_4_18
Type: TC
Location: 24290 - 25666 (-)
Gene ID: Rep_2488_c_4_19
Type: pfam
Location: 25685 - 26803 (-)
Gene ID: Rep_2488_c_4_20
Type: pfam
Location: 26813 - 27916 (-)
Gene ID: Rep_2488_c_4_21
Type: TC
Location: 27933 - 28955 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
UBA1381
→
Family
UBA1381
→
Genus
HGM11530
→
Species
HGM11530 sp900751685

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List