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Cluster: Rep_2488_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2488_c_3 Rep_2488_c_3_42 51010 53160 + GH105
TC Rep_2488_c_3 Rep_2488_c_3_43 53499 54473 + 3.A.1.1.10
TC Rep_2488_c_3 Rep_2488_c_3_44 54495 55376 + 3.A.1.1.10
TC Rep_2488_c_3 Rep_2488_c_3_45 55509 57035 + 3.A.1.1.10
STP Rep_2488_c_3 Rep_2488_c_3_46 57360 58730 + PALP
CAZyme Rep_2488_c_3 Rep_2488_c_3_47 58745 59527 + CE4
TC Rep_2488_c_3 Rep_2488_c_3_48 59625 61346 - 3.A.1.135.5
TC Rep_2488_c_3 Rep_2488_c_3_49 61336 63069 - 3.A.1.135.5
CAZyme Rep_2488_c_3 Rep_2488_c_3_50 63456 66173 + PL11_1
STP Rep_2488_c_3 Rep_2488_c_3_51 66230 66688 + NUDIX
TC Rep_2488_c_3 Rep_2488_c_3_52 66879 69506 + 4.A.2.1.17
Gene ID: Rep_2488_c_3_42
Type: CAZyme
Location: 51010 - 53160 (+)
Gene ID: Rep_2488_c_3_43
Type: TC
Location: 53499 - 54473 (+)
Gene ID: Rep_2488_c_3_44
Type: TC
Location: 54495 - 55376 (+)
Gene ID: Rep_2488_c_3_45
Type: TC
Location: 55509 - 57035 (+)
Gene ID: Rep_2488_c_3_46
Type: STP
Location: 57360 - 58730 (+)
Gene ID: Rep_2488_c_3_47
Type: CAZyme
Location: 58745 - 59527 (+)
Gene ID: Rep_2488_c_3_48
Type: TC
Location: 59625 - 61346 (-)
Gene ID: Rep_2488_c_3_49
Type: TC
Location: 61336 - 63069 (-)
Gene ID: Rep_2488_c_3_50
Type: CAZyme
Location: 63456 - 66173 (+)
Gene ID: Rep_2488_c_3_51
Type: STP
Location: 66230 - 66688 (+)
Gene ID: Rep_2488_c_3_52
Type: TC
Location: 66879 - 69506 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
UBA1381
→
Family
UBA1381
→
Genus
HGM11530
→
Species
HGM11530 sp900751685

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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