Cluster: Rep_2488_CGC29
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2488
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2488_c_84 | Rep_2488_c_84_4 | 2162 | 3601 | + | 9.B.174.1.1 |
| TF | Rep_2488_c_84 | Rep_2488_c_84_5 | 3875 | 4597 | + | LytTR |
| pfam | Rep_2488_c_84 | Rep_2488_c_84_6 | 4601 | 5953 | + | HATPase_c_5 |
| CAZyme | Rep_2488_c_84 | Rep_2488_c_84_7 | 6113 | 7846 | + | GH73 |
Gene ID: Rep_2488_c_84_4
Type: TC
Location: 2162 - 3601 (+)
Type: TC
Location: 2162 - 3601 (+)
Gene ID: Rep_2488_c_84_5
Type: TF
Location: 3875 - 4597 (+)
Type: TF
Location: 3875 - 4597 (+)
Gene ID: Rep_2488_c_84_6
Type: pfam
Location: 4601 - 5953 (+)
Type: pfam
Location: 4601 - 5953 (+)
Gene ID: Rep_2488_c_84_7
Type: CAZyme
Location: 6113 - 7846 (+)
Type: CAZyme
Location: 6113 - 7846 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UBA1381
Genus
HGM11530
Species
HGM11530 sp900751685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.