Cluster: Rep_2488_CGC24
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2488
- CGC Family ID: CGCFAM_03803
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2488_c_60 | Rep_2488_c_60_14 | 12776 | 14530 | - | 2.A.58.2.2 |
| pfam | Rep_2488_c_60 | Rep_2488_c_60_15 | 15207 | 16034 | - | BacA |
| TC | Rep_2488_c_60 | Rep_2488_c_60_16 | 16068 | 16700 | - | 2.A.115.2.14 |
| CAZyme | Rep_2488_c_60 | Rep_2488_c_60_17 | 16716 | 17273 | - | GH23 |
Gene ID: Rep_2488_c_60_14
Type: TC
Location: 12776 - 14530 (-)
Type: TC
Location: 12776 - 14530 (-)
Gene ID: Rep_2488_c_60_15
Type: pfam
Location: 15207 - 16034 (-)
Type: pfam
Location: 15207 - 16034 (-)
Gene ID: Rep_2488_c_60_16
Type: TC
Location: 16068 - 16700 (-)
Type: TC
Location: 16068 - 16700 (-)
Gene ID: Rep_2488_c_60_17
Type: CAZyme
Location: 16716 - 17273 (-)
Type: CAZyme
Location: 16716 - 17273 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UBA1381
Genus
HGM11530
Species
HGM11530 sp900751685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.