Cluster: Rep_2488_CGC23
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2488
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2488_c_60 | Rep_2488_c_60_4 | 1483 | 2295 | + | CE4 |
| pfam | Rep_2488_c_60 | Rep_2488_c_60_5 | 2295 | 3011 | + | DUF2161 |
| TC | Rep_2488_c_60 | Rep_2488_c_60_6 | 3065 | 4426 | - | 1.A.26.1.2 |
| NULL(UNKNOWN) | Rep_2488_c_60 | Rep_2488_c_60_7 | 4471 | 4560 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_2488_c_60 | Rep_2488_c_60_8 | 4590 | 5723 | - | Epimerase_2 | LpxB |
| TC | Rep_2488_c_60 | Rep_2488_c_60_9 | 5780 | 6976 | - | 9.B.146.1.4 |
Gene ID: Rep_2488_c_60_4
Type: CAZyme
Location: 1483 - 2295 (+)
Type: CAZyme
Location: 1483 - 2295 (+)
Gene ID: Rep_2488_c_60_5
Type: pfam
Location: 2295 - 3011 (+)
Type: pfam
Location: 2295 - 3011 (+)
Gene ID: Rep_2488_c_60_6
Type: TC
Location: 3065 - 4426 (-)
Type: TC
Location: 3065 - 4426 (-)
Gene ID: Rep_2488_c_60_7
Type:
Location: 4471 - 4560 (-)
Type:
Location: 4471 - 4560 (-)
Gene ID: Rep_2488_c_60_8
Type: pfam
Location: 4590 - 5723 (-)
Type: pfam
Location: 4590 - 5723 (-)
Gene ID: Rep_2488_c_60_9
Type: TC
Location: 5780 - 6976 (-)
Type: TC
Location: 5780 - 6976 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UBA1381
Genus
HGM11530
Species
HGM11530 sp900751685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.