Cluster: Rep_2488_CGC22
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_2488
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2488_c_59 | Rep_2488_c_59_12 | 10290 | 11402 | - | GT4 |
| TC | Rep_2488_c_59 | Rep_2488_c_59_13 | 11395 | 13281 | - | 9.B.67.1.1 |
| TC | Rep_2488_c_59 | Rep_2488_c_59_14 | 13298 | 14845 | - | 2.A.66.4.7 |
| CAZyme | Rep_2488_c_59 | Rep_2488_c_59_15 | 14842 | 17082 | - | GT4 |
| CAZyme | Rep_2488_c_59 | Rep_2488_c_59_16 | 17375 | 18706 | + | GH1 |
| TC | Rep_2488_c_59 | Rep_2488_c_59_17 | 18749 | 19096 | + | 2.A.22.5.3 |
Gene ID: Rep_2488_c_59_12
Type: CAZyme
Location: 10290 - 11402 (-)
Type: CAZyme
Location: 10290 - 11402 (-)
Gene ID: Rep_2488_c_59_13
Type: TC
Location: 11395 - 13281 (-)
Type: TC
Location: 11395 - 13281 (-)
Gene ID: Rep_2488_c_59_14
Type: TC
Location: 13298 - 14845 (-)
Type: TC
Location: 13298 - 14845 (-)
Gene ID: Rep_2488_c_59_15
Type: CAZyme
Location: 14842 - 17082 (-)
Type: CAZyme
Location: 14842 - 17082 (-)
Gene ID: Rep_2488_c_59_16
Type: CAZyme
Location: 17375 - 18706 (+)
Type: CAZyme
Location: 17375 - 18706 (+)
Gene ID: Rep_2488_c_59_17
Type: TC
Location: 18749 - 19096 (+)
Type: TC
Location: 18749 - 19096 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UBA1381
Genus
HGM11530
Species
HGM11530 sp900751685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.