Cluster: Rep_2488_CGC21
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2488
- CGC Family ID: CGCFAM_01871
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2488_c_59 | Rep_2488_c_59_4 | 2387 | 5119 | + | GH2 |
| pfam | Rep_2488_c_59 | Rep_2488_c_59_5 | 5148 | 5792 | + | Methyltransf_2 | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31 |
| TC | Rep_2488_c_59 | Rep_2488_c_59_6 | 5888 | 7354 | - | 2.A.25.1.3 |
Gene ID: Rep_2488_c_59_4
Type: CAZyme
Location: 2387 - 5119 (+)
Type: CAZyme
Location: 2387 - 5119 (+)
Gene ID: Rep_2488_c_59_5
Type: pfam
Location: 5148 - 5792 (+)
Type: pfam
Location: 5148 - 5792 (+)
Gene ID: Rep_2488_c_59_6
Type: TC
Location: 5888 - 7354 (-)
Type: TC
Location: 5888 - 7354 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UBA1381
Genus
HGM11530
Species
HGM11530 sp900751685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.