Cluster: Rep_2488_CGC15
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2488
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2488_c_28 | Rep_2488_c_28_21 | 19616 | 21613 | - | GH115 |
| TF | Rep_2488_c_28 | Rep_2488_c_28_22 | 21747 | 22562 | + | HTH_AraC | HTH_AraC |
| pfam | Rep_2488_c_28 | Rep_2488_c_28_23 | 22641 | 23357 | + | Radical_SAM | Fer4_12 |
| TC | Rep_2488_c_28 | Rep_2488_c_28_24 | 23360 | 23899 | + | 2.A.107.1.2 |
Gene ID: Rep_2488_c_28_21
Type: CAZyme
Location: 19616 - 21613 (-)
Type: CAZyme
Location: 19616 - 21613 (-)
Gene ID: Rep_2488_c_28_22
Type: TF
Location: 21747 - 22562 (+)
Type: TF
Location: 21747 - 22562 (+)
Gene ID: Rep_2488_c_28_23
Type: pfam
Location: 22641 - 23357 (+)
Type: pfam
Location: 22641 - 23357 (+)
Gene ID: Rep_2488_c_28_24
Type: TC
Location: 23360 - 23899 (+)
Type: TC
Location: 23360 - 23899 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UBA1381
Genus
HGM11530
Species
HGM11530 sp900751685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.