Cluster: Rep_2488_CGC12
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2488
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2488_c_18 | Rep_2488_c_18_15 | 15392 | 19669 | + | CE12 |
| TC | Rep_2488_c_18 | Rep_2488_c_18_16 | 19754 | 20941 | + | 3.A.11.1.4 |
| TF | Rep_2488_c_18 | Rep_2488_c_18_17 | 20993 | 21637 | - | HTH_3 |
| TC | Rep_2488_c_18 | Rep_2488_c_18_18 | 21828 | 24518 | - | 3.A.3.2.21 |
| NULL(UNKNOWN) | Rep_2488_c_18 | Rep_2488_c_18_19 | 24906 | 26108 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_2488_c_18 | Rep_2488_c_18_20 | 26116 | 27648 | - | GH51_1 |
Gene ID: Rep_2488_c_18_15
Type: CAZyme
Location: 15392 - 19669 (+)
Type: CAZyme
Location: 15392 - 19669 (+)
Gene ID: Rep_2488_c_18_16
Type: TC
Location: 19754 - 20941 (+)
Type: TC
Location: 19754 - 20941 (+)
Gene ID: Rep_2488_c_18_17
Type: TF
Location: 20993 - 21637 (-)
Type: TF
Location: 20993 - 21637 (-)
Gene ID: Rep_2488_c_18_18
Type: TC
Location: 21828 - 24518 (-)
Type: TC
Location: 21828 - 24518 (-)
Gene ID: Rep_2488_c_18_19
Type:
Location: 24906 - 26108 (-)
Type:
Location: 24906 - 26108 (-)
Gene ID: Rep_2488_c_18_20
Type: CAZyme
Location: 26116 - 27648 (-)
Type: CAZyme
Location: 26116 - 27648 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UBA1381
Genus
HGM11530
Species
HGM11530 sp900751685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.