Cluster: Rep_2488_CGC10
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2488
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2488_c_11 | Rep_2488_c_11_6 | 2470 | 4293 | - | 2.A.16.2.2 |
| TC | Rep_2488_c_11 | Rep_2488_c_11_7 | 4359 | 5687 | - | 2.A.66.1.37 |
| TF | Rep_2488_c_11 | Rep_2488_c_11_8 | 5769 | 6641 | + | MerR |
| peptidase | Rep_2488_c_11 | Rep_2488_c_11_9 | 7377 | 8681 | - | C26.957 |
| CAZyme | Rep_2488_c_11 | Rep_2488_c_11_10 | 8873 | 13189 | - | CBM96 |
| TF | Rep_2488_c_11 | Rep_2488_c_11_11 | 13291 | 14148 | - | HTH_AraC |
| pfam | Rep_2488_c_11 | Rep_2488_c_11_12 | 14504 | 14875 | + | Hpt |
| TC | Rep_2488_c_11 | Rep_2488_c_11_13 | 14872 | 18015 | + | 2.A.21.9.1 |
Gene ID: Rep_2488_c_11_6
Type: TC
Location: 2470 - 4293 (-)
Type: TC
Location: 2470 - 4293 (-)
Gene ID: Rep_2488_c_11_7
Type: TC
Location: 4359 - 5687 (-)
Type: TC
Location: 4359 - 5687 (-)
Gene ID: Rep_2488_c_11_8
Type: TF
Location: 5769 - 6641 (+)
Type: TF
Location: 5769 - 6641 (+)
Gene ID: Rep_2488_c_11_9
Type: peptidase
Location: 7377 - 8681 (-)
Type: peptidase
Location: 7377 - 8681 (-)
Gene ID: Rep_2488_c_11_10
Type: CAZyme
Location: 8873 - 13189 (-)
Type: CAZyme
Location: 8873 - 13189 (-)
Gene ID: Rep_2488_c_11_11
Type: TF
Location: 13291 - 14148 (-)
Type: TF
Location: 13291 - 14148 (-)
Gene ID: Rep_2488_c_11_12
Type: pfam
Location: 14504 - 14875 (+)
Type: pfam
Location: 14504 - 14875 (+)
Gene ID: Rep_2488_c_11_13
Type: TC
Location: 14872 - 18015 (+)
Type: TC
Location: 14872 - 18015 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UBA1381
Genus
HGM11530
Species
HGM11530 sp900751685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.