Cluster: Rep_2488_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_2488
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2488_c_0 | Rep_2488_c_0_35 | 49526 | 50785 | - | GH27 |
| NULL(UNKNOWN) | Rep_2488_c_0 | Rep_2488_c_0_36 | 50975 | 51142 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| peptidase | Rep_2488_c_0 | Rep_2488_c_0_37 | 51129 | 51911 | - | S33.UPW |
| CAZyme | Rep_2488_c_0 | Rep_2488_c_0_38 | 52175 | 52867 | + | CE3 |
| TC | Rep_2488_c_0 | Rep_2488_c_0_39 | 52864 | 54630 | + | 3.A.1.106.2 |
| TF | Rep_2488_c_0 | Rep_2488_c_0_40 | 54859 | 55095 | + | HTH_3 |
| CAZyme | Rep_2488_c_0 | Rep_2488_c_0_41 | 55242 | 57338 | + | PL11_1 |
Gene ID: Rep_2488_c_0_35
Type: CAZyme
Location: 49526 - 50785 (-)
Type: CAZyme
Location: 49526 - 50785 (-)
Gene ID: Rep_2488_c_0_36
Type:
Location: 50975 - 51142 (-)
Type:
Location: 50975 - 51142 (-)
Gene ID: Rep_2488_c_0_37
Type: peptidase
Location: 51129 - 51911 (-)
Type: peptidase
Location: 51129 - 51911 (-)
Gene ID: Rep_2488_c_0_38
Type: CAZyme
Location: 52175 - 52867 (+)
Type: CAZyme
Location: 52175 - 52867 (+)
Gene ID: Rep_2488_c_0_39
Type: TC
Location: 52864 - 54630 (+)
Type: TC
Location: 52864 - 54630 (+)
Gene ID: Rep_2488_c_0_40
Type: TF
Location: 54859 - 55095 (+)
Type: TF
Location: 54859 - 55095 (+)
Gene ID: Rep_2488_c_0_41
Type: CAZyme
Location: 55242 - 57338 (+)
Type: CAZyme
Location: 55242 - 57338 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UBA1381
Genus
HGM11530
Species
HGM11530 sp900751685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.