Cluster: Rep_2487_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2487
- CGC Family ID: CGCFAM_08106
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2487_c_31 | Rep_2487_c_31_4 | 1533 | 3467 | - | 3.A.2.3.3 |
| pfam | Rep_2487_c_31 | Rep_2487_c_31_5 | 3494 | 4540 | - | vATP-synt_AC39 |
| NULL(UNKNOWN) | Rep_2487_c_31 | Rep_2487_c_31_6 | 4578 | 4901 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_2487_c_31 | Rep_2487_c_31_7 | 5042 | 5992 | - | CE4 |
| pfam | Rep_2487_c_31 | Rep_2487_c_31_8 | 6030 | 7145 | - | Epimerase | Polysacc_synt_2 | GPI | NAD_binding_4 | Polysacc_synt_C |
| pfam | Rep_2487_c_31 | Rep_2487_c_31_9 | 7197 | 8417 | - | Wzy_C |
| CAZyme | Rep_2487_c_31 | Rep_2487_c_31_10 | 8383 | 9543 | - | GT4 |
Gene ID: Rep_2487_c_31_4
Type: TC
Location: 1533 - 3467 (-)
Type: TC
Location: 1533 - 3467 (-)
Gene ID: Rep_2487_c_31_5
Type: pfam
Location: 3494 - 4540 (-)
Type: pfam
Location: 3494 - 4540 (-)
Gene ID: Rep_2487_c_31_6
Type:
Location: 4578 - 4901 (-)
Type:
Location: 4578 - 4901 (-)
Gene ID: Rep_2487_c_31_7
Type: CAZyme
Location: 5042 - 5992 (-)
Type: CAZyme
Location: 5042 - 5992 (-)
Gene ID: Rep_2487_c_31_8
Type: pfam
Location: 6030 - 7145 (-)
Type: pfam
Location: 6030 - 7145 (-)
Gene ID: Rep_2487_c_31_9
Type: pfam
Location: 7197 - 8417 (-)
Type: pfam
Location: 7197 - 8417 (-)
Gene ID: Rep_2487_c_31_10
Type: CAZyme
Location: 8383 - 9543 (-)
Type: CAZyme
Location: 8383 - 9543 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1212
Family
SIG427
Genus
SIG427
Species
SIG427 sp902465325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.