Cluster: Rep_2477_CGC6
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2477
- CGC Family ID: CGCFAM_02019
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2477_c_188 | Rep_2477_c_188_1 | 198 | 1343 | + | GT2 |
| pfam | Rep_2477_c_188 | Rep_2477_c_188_2 | 1814 | 2362 | - | LigT_PEase | LigT_PEase | 2_5_RNA_ligase2 |
| TC | Rep_2477_c_188 | Rep_2477_c_188_3 | 2484 | 3659 | + | 3.A.11.1.3 |
Gene ID: Rep_2477_c_188_1
Type: CAZyme
Location: 198 - 1343 (+)
Type: CAZyme
Location: 198 - 1343 (+)
Gene ID: Rep_2477_c_188_2
Type: pfam
Location: 1814 - 2362 (-)
Type: pfam
Location: 1814 - 2362 (-)
Gene ID: Rep_2477_c_188_3
Type: TC
Location: 2484 - 3659 (+)
Type: TC
Location: 2484 - 3659 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Christensenellaceae
Genus
Guopingia
Species
Guopingia tenuis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.