Cluster: Rep_2477_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2477
- CGC Family ID: CGCFAM_05146
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2477_c_45 | Rep_2477_c_45_7 | 5053 | 6126 | - | GT28 |
| CAZyme | Rep_2477_c_45 | Rep_2477_c_45_8 | 6323 | 7450 | + | GT28 |
| TF | Rep_2477_c_45 | Rep_2477_c_45_9 | 7458 | 8219 | + | HTH_DeoR |
| pfam | Rep_2477_c_45 | Rep_2477_c_45_10 | 8291 | 8923 | + | Lipase_GDSL | Lipase_GDSL_2 |
| TC | Rep_2477_c_45 | Rep_2477_c_45_11 | 9297 | 10817 | + | 4.C.1.1.7 |
Gene ID: Rep_2477_c_45_7
Type: CAZyme
Location: 5053 - 6126 (-)
Type: CAZyme
Location: 5053 - 6126 (-)
Gene ID: Rep_2477_c_45_8
Type: CAZyme
Location: 6323 - 7450 (+)
Type: CAZyme
Location: 6323 - 7450 (+)
Gene ID: Rep_2477_c_45_9
Type: TF
Location: 7458 - 8219 (+)
Type: TF
Location: 7458 - 8219 (+)
Gene ID: Rep_2477_c_45_10
Type: pfam
Location: 8291 - 8923 (+)
Type: pfam
Location: 8291 - 8923 (+)
Gene ID: Rep_2477_c_45_11
Type: TC
Location: 9297 - 10817 (+)
Type: TC
Location: 9297 - 10817 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Christensenellaceae
Genus
Guopingia
Species
Guopingia tenuis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.