Cluster: Rep_2477_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2477
- CGC Family ID: CGCFAM_10879
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2477_c_2 | Rep_2477_c_2_23 | 22652 | 24847 | - | GH63 |
| TC | Rep_2477_c_2 | Rep_2477_c_2_24 | 24858 | 25895 | - | 3.A.1.20.1 |
| pfam | Rep_2477_c_2 | Rep_2477_c_2_25 | 25876 | 26436 | - | Isochorismatase |
| TC | Rep_2477_c_2 | Rep_2477_c_2_26 | 26430 | 27218 | - | 3.A.1.11.1 |
| TC | Rep_2477_c_2 | Rep_2477_c_2_27 | 27215 | 28105 | - | 3.A.1.11.3 |
Gene ID: Rep_2477_c_2_23
Type: CAZyme
Location: 22652 - 24847 (-)
Type: CAZyme
Location: 22652 - 24847 (-)
Gene ID: Rep_2477_c_2_24
Type: TC
Location: 24858 - 25895 (-)
Type: TC
Location: 24858 - 25895 (-)
Gene ID: Rep_2477_c_2_25
Type: pfam
Location: 25876 - 26436 (-)
Type: pfam
Location: 25876 - 26436 (-)
Gene ID: Rep_2477_c_2_26
Type: TC
Location: 26430 - 27218 (-)
Type: TC
Location: 26430 - 27218 (-)
Gene ID: Rep_2477_c_2_27
Type: TC
Location: 27215 - 28105 (-)
Type: TC
Location: 27215 - 28105 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Christensenellaceae
Genus
Guopingia
Species
Guopingia tenuis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.