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Cluster: Rep_2471_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2471_c_83 Rep_2471_c_83_4 5889 7214 + 2.A.66.1.37
pfam Rep_2471_c_83 Rep_2471_c_83_5 7237 7806 + Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_10
TF Rep_2471_c_83 Rep_2471_c_83_6 8011 8988 + HTH_11
TC Rep_2471_c_83 Rep_2471_c_83_7 9069 9650 - 2.A.107.1.2
TC Rep_2471_c_83 Rep_2471_c_83_8 10308 11765 - 2.A.1.84.3
CAZyme Rep_2471_c_83 Rep_2471_c_83_9 12019 14412 - GH2
Gene ID: Rep_2471_c_83_4
Type: TC
Location: 5889 - 7214 (+)
Gene ID: Rep_2471_c_83_5
Type: pfam
Location: 7237 - 7806 (+)
Gene ID: Rep_2471_c_83_6
Type: TF
Location: 8011 - 8988 (+)
Gene ID: Rep_2471_c_83_7
Type: TC
Location: 9069 - 9650 (-)
Gene ID: Rep_2471_c_83_8
Type: TC
Location: 10308 - 11765 (-)
Gene ID: Rep_2471_c_83_9
Type: CAZyme
Location: 12019 - 14412 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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