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Cluster: Rep_2471_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2471_c_61 Rep_2471_c_61_2 610 2442 - GT5
pfam Rep_2471_c_61 Rep_2471_c_61_3 2460 3575 - NTP_transferase | Hexapep_GlmU
pfam Rep_2471_c_61 Rep_2471_c_61_4 3587 4780 - NTP_transferase | Hexapep_GlmU
CAZyme Rep_2471_c_61 Rep_2471_c_61_5 4838 6760 - CBM48 | GH13_9
pfam Rep_2471_c_61 Rep_2471_c_61_6 6910 7896 - GFO_IDH_MocA | Shikimate_DH | GFO_IDH_MocA_C | F420_oxidored | GFO_IDH_MocA_C3
TC Rep_2471_c_61 Rep_2471_c_61_7 8002 9564 + 3.A.1.121.4
pfam Rep_2471_c_61 Rep_2471_c_61_8 9712 10665 + Rsm22 | Methyltransf_25 | Methyltransf_31
TC Rep_2471_c_61 Rep_2471_c_61_9 10718 12286 - 2.A.49.5.5
Gene ID: Rep_2471_c_61_2
Type: CAZyme
Location: 610 - 2442 (-)
Gene ID: Rep_2471_c_61_3
Type: pfam
Location: 2460 - 3575 (-)
Gene ID: Rep_2471_c_61_4
Type: pfam
Location: 3587 - 4780 (-)
Gene ID: Rep_2471_c_61_5
Type: CAZyme
Location: 4838 - 6760 (-)
Gene ID: Rep_2471_c_61_6
Type: pfam
Location: 6910 - 7896 (-)
Gene ID: Rep_2471_c_61_7
Type: TC
Location: 8002 - 9564 (+)
Gene ID: Rep_2471_c_61_8
Type: pfam
Location: 9712 - 10665 (+)
Gene ID: Rep_2471_c_61_9
Type: TC
Location: 10718 - 12286 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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