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Cluster: Rep_2471_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2471_c_41 Rep_2471_c_41_10 9535 10962 - 3.A.1.5.19
TC Rep_2471_c_41 Rep_2471_c_41_11 10955 13177 - 3.A.1.5.25
TC Rep_2471_c_41 Rep_2471_c_41_12 13179 14741 - 3.A.1.5.19
TC Rep_2471_c_41 Rep_2471_c_41_13 14744 15703 - 3.A.1.5.19
STP Rep_2471_c_41 Rep_2471_c_41_14 15819 18332 - SBP_bac_5
CAZyme Rep_2471_c_41 Rep_2471_c_41_15 18524 20080 - GH30_4
NULL(UNKNOWN) Rep_2471_c_41 Rep_2471_c_41_16 20067 20678 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_2471_c_41 Rep_2471_c_41_17 21068 21979 + GH33
Gene ID: Rep_2471_c_41_10
Type: TC
Location: 9535 - 10962 (-)
Gene ID: Rep_2471_c_41_11
Type: TC
Location: 10955 - 13177 (-)
Gene ID: Rep_2471_c_41_12
Type: TC
Location: 13179 - 14741 (-)
Gene ID: Rep_2471_c_41_13
Type: TC
Location: 14744 - 15703 (-)
Gene ID: Rep_2471_c_41_14
Type: STP
Location: 15819 - 18332 (-)
Gene ID: Rep_2471_c_41_15
Type: CAZyme
Location: 18524 - 20080 (-)
Gene ID: Rep_2471_c_41_16
Type:
Location: 20067 - 20678 (-)
Gene ID: Rep_2471_c_41_17
Type: CAZyme
Location: 21068 - 21979 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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