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Cluster: Rep_2471_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2471_c_133 Rep_2471_c_133_15 15203 17143 + 2.A.2.3.3
CAZyme Rep_2471_c_133 Rep_2471_c_133_16 17220 20171 - GH38
STP Rep_2471_c_133 Rep_2471_c_133_17 20405 21223 - FeS | Fer4 | Fer4 | Fer4
TC Rep_2471_c_133 Rep_2471_c_133_18 21239 21844 - 3.D.6.1.2
TC Rep_2471_c_133 Rep_2471_c_133_19 21846 22601 - 3.D.6.1.2
pfam Rep_2471_c_133 Rep_2471_c_133_20 22603 23187 - FMN_bind
TC Rep_2471_c_133 Rep_2471_c_133_21 23184 24218 - 3.D.6.1.2
TC Rep_2471_c_133 Rep_2471_c_133_22 24235 25536 - 3.D.6.1.2
Gene ID: Rep_2471_c_133_15
Type: TC
Location: 15203 - 17143 (+)
Gene ID: Rep_2471_c_133_16
Type: CAZyme
Location: 17220 - 20171 (-)
Gene ID: Rep_2471_c_133_17
Type: STP
Location: 20405 - 21223 (-)
Gene ID: Rep_2471_c_133_18
Type: TC
Location: 21239 - 21844 (-)
Gene ID: Rep_2471_c_133_19
Type: TC
Location: 21846 - 22601 (-)
Gene ID: Rep_2471_c_133_20
Type: pfam
Location: 22603 - 23187 (-)
Gene ID: Rep_2471_c_133_21
Type: TC
Location: 23184 - 24218 (-)
Gene ID: Rep_2471_c_133_22
Type: TC
Location: 24235 - 25536 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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