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Cluster: Rep_2466_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2466_c_37 Rep_2466_c_37_42 59756 60847 - CE9
STP Rep_2466_c_37 Rep_2466_c_37_43 61420 63240 - HATPase_c
pfam Rep_2466_c_37 Rep_2466_c_37_44 63405 63806 - HSP20
TC Rep_2466_c_37 Rep_2466_c_37_45 64717 65943 - 3.A.16.1.2
pfam Rep_2466_c_37 Rep_2466_c_37_46 66133 66429 + DUF4368
TC Rep_2466_c_37 Rep_2466_c_37_47 67111 68328 + 4.D.2.1.7
CAZyme Rep_2466_c_37 Rep_2466_c_37_48 68325 69464 + GT28
NULL(UNKNOWN) Rep_2466_c_37 Rep_2466_c_37_49 69421 69996 + NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_2466_c_37 Rep_2466_c_37_50 70111 71202 - RF-1 | PCRF
TC Rep_2466_c_37 Rep_2466_c_37_51 71204 73999 - 3.A.5.1.3
STP Rep_2466_c_37 Rep_2466_c_37_52 73996 74742 - Pribosyltran
TC Rep_2466_c_37 Rep_2466_c_37_53 74739 77015 - 3.A.7.16.1
Gene ID: Rep_2466_c_37_42
Type: CAZyme
Location: 59756 - 60847 (-)
Gene ID: Rep_2466_c_37_43
Type: STP
Location: 61420 - 63240 (-)
Gene ID: Rep_2466_c_37_44
Type: pfam
Location: 63405 - 63806 (-)
Gene ID: Rep_2466_c_37_45
Type: TC
Location: 64717 - 65943 (-)
Gene ID: Rep_2466_c_37_46
Type: pfam
Location: 66133 - 66429 (+)
Gene ID: Rep_2466_c_37_47
Type: TC
Location: 67111 - 68328 (+)
Gene ID: Rep_2466_c_37_48
Type: CAZyme
Location: 68325 - 69464 (+)
Gene ID: Rep_2466_c_37_49
Type:
Location: 69421 - 69996 (+)
Gene ID: Rep_2466_c_37_50
Type: pfam
Location: 70111 - 71202 (-)
Gene ID: Rep_2466_c_37_51
Type: TC
Location: 71204 - 73999 (-)
Gene ID: Rep_2466_c_37_52
Type: STP
Location: 73996 - 74742 (-)
Gene ID: Rep_2466_c_37_53
Type: TC
Location: 74739 - 77015 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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