Cluster: Rep_2462_CGC9
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2462
- CGC Family ID: CGCFAM_02508
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2462_c_32 | Rep_2462_c_32_10 | 14597 | 16708 | - | GH36 |
| pfam | Rep_2462_c_32 | Rep_2462_c_32_11 | 16727 | 17686 | - | Lipase_GDSL_2 |
| TC | Rep_2462_c_32 | Rep_2462_c_32_12 | 17688 | 19313 | - | 3.A.1.1.26 |
| TC | Rep_2462_c_32 | Rep_2462_c_32_13 | 19327 | 20313 | - | 3.A.1.1.36 |
| TC | Rep_2462_c_32 | Rep_2462_c_32_14 | 20306 | 21388 | - | 3.A.1.1.4 |
| STP | Rep_2462_c_32 | Rep_2462_c_32_15 | 21413 | 22942 | - | SBP_bac_1 |
| CAZyme | Rep_2462_c_32 | Rep_2462_c_32_16 | 22939 | 24666 | - | GH43_33 |
Gene ID: Rep_2462_c_32_10
Type: CAZyme
Location: 14597 - 16708 (-)
Type: CAZyme
Location: 14597 - 16708 (-)
Gene ID: Rep_2462_c_32_11
Type: pfam
Location: 16727 - 17686 (-)
Type: pfam
Location: 16727 - 17686 (-)
Gene ID: Rep_2462_c_32_12
Type: TC
Location: 17688 - 19313 (-)
Type: TC
Location: 17688 - 19313 (-)
Gene ID: Rep_2462_c_32_13
Type: TC
Location: 19327 - 20313 (-)
Type: TC
Location: 19327 - 20313 (-)
Gene ID: Rep_2462_c_32_14
Type: TC
Location: 20306 - 21388 (-)
Type: TC
Location: 20306 - 21388 (-)
Gene ID: Rep_2462_c_32_15
Type: STP
Location: 21413 - 22942 (-)
Type: STP
Location: 21413 - 22942 (-)
Gene ID: Rep_2462_c_32_16
Type: CAZyme
Location: 22939 - 24666 (-)
Type: CAZyme
Location: 22939 - 24666 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-314
Genus
Limihabitans
Species
Limihabitans stercoravium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.